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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926731.1_cds_XP_016474709.1_66707
CDS Infomation

[gene=LOC107796452] [db_xref=GeneID:107796452] [protein=shaggy-related protein kinase epsilon-like] [protein_id=XP_016474709.1] [location=complement(join(11369..11451,11529..11631,12514..12597,12691..12786,12870..12920,13022..13162,13846..13902,13975..14046,14230..14502,14664..14723,16068..16160,16258..16377))] [gbkey=CDS]
Sequence

ATGGCTTCTGGTGGTATAATTCCTTCAGCAGGTGGAAAACCTCAAACTGATGCCATGCTT
GTCGACAAACTTCCTGAAGAAATAAATGAAATGAAGATCAGAGATGATAAAGTAGAAAAG
GAAATGGAAGCAGCTGTAGTGGATGGAAATGGAACAGAAAAAGGCCACATCATTGTAACA
ACTATTGGGGGGAAAAATGGCGAGCCTAAGCAGACCATTAGTTACATGGCCGAGCGTGTC
GTTGGACAGGGTTCCTTTGGAATTGTGTTCCAGGCCAAATGCCTTGAAACTGGAGAAACT
GTGGCAATAAAAAAGGTTTTACAGGATAAGAGATACAAGAATCGGGAATTGCAAACAATA
CGCCTTCTTGATCATCCTAATGTTGTTTCACTGAGGCATTGCTTCTTTTCAACCACAGAA
AAGGATGAGCTTTATCTAAATTTGGTTCTTGAATATGTACCTGAGACTGTATACCGTGTA
TTGAGACATTACAGCAAAGCAAACCAAAGGATGCCTATGATTTATGTCAAGCTCTATACA
TATCAGATTTTCAGAGCTTTGGCTTACATACACGGGATAGGAGTCTGCCACAGGGACATC
AAGCCTCAGAATTTACTGGTCAACCCCCACACACACCAGCTTAAGCTCTGCGATTTTGGG
AGTGCAAAAGTTCTGGTCAAAGGCGAGCCGAATATTTCATATATTTGTTCTCGTTACTAT
CGTGCACCTGAACTTATTTTTGGAGCAACTGAATACACGTTTGCAATTGACATTTGGTCT
GTGGGTTGCGTCCTTGCTGAACTGCTTCTTGGGCAGCCCCTCTTTCCCGGTGAGAGTGGA
GTTGATCAGCTTGTTGAAATAATCAAGGTTCTTGGAACACCAACTCGGGAGGAAATCAAG
TGTATGAATCCAAATTACACCGAGTTTAAATTCCCACAAATCAAAGCTCACCCTTGGCAC
AAAATTTTTCATAAGCGGATGCCTCCCGAAGCCGTGGATCTTGTGTCAAGGCTTCTCCAG
TATTCTCCAAATTTGAGGTCCACAGCGTTGGAGGCTTGCACTCACACTTTCTTTGATGAA
CTCCGTGACCCTAAGGCTCGTCTGCCTAATGGTCGGCCATTGCCACCTCTGTTCAACTTC
AGGCCTCAAGAGCTGAAAGGAGCGTCTGCAGAGCTCTTAAACAAACTGATACCAGAACAC
GCTAAGAAGCAGTGTACCTCCCTTGGTTTCTAG

Peptide Sequence

PEP ID

XP_016474709.1
PEP Infomation

PREDICTED: shaggy-related protein kinase epsilon-like [Nicotiana tabacum]
Sequence

MASGGIIPSAGGKPQTDAMLVDKLPEEINEMKIRDDKVEKEMEAAVVDGNGTEKGHIIVT
TIGGKNGEPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTI
RLLDHPNVVSLRHCFFSTTEKDELYLNLVLEYVPETVYRVLRHYSKANQRMPMIYVKLYT
YQIFRALAYIHGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYY
RAPELIFGATEYTFAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK
CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEACTHTFFDE
LRDPKARLPNGRPLPPLFNFRPQELKGASAELLNKLIPEHAKKQCTSLGF

Transcript Sequence

Gene sequence data has not been registered.